datamining

Here we are going to see how to use scispaCy named entity recognition (NER) models to identify drug and disease names mentioned in a medical transcription dataset. Moreover, we are going to combine NER and rule-based matching to extract the drug names and dosages reported in each transcription.

Command-line tool to automate the search for microRNA targets in the miRDB base and extract the number of binding sites

A command-line tool to fetch data from articles available on PubMed

Word2Vec word embedding analysis on Autism Spectrum Disorder (ASD) articles abstracts available on PubMed